2017 Publications

See below the list of our 2017 publications
Publications 2017
  • Albadri S, Del Bene F and Revenu C (2017) Genome editing using CRISPR/Cas9-based knock-in approaches in zebrafish. Methods. 121-122:77-85. doi: 10.1016/j.ymeth.2017.03.005.
  • Batté A, Brocas C, Bordelet H, Hocher A, Ruault M, Adjiri A, Taddei A* and Dubrana K* (2017) Recombination at subtelomeres is regulated by physical distance, double-strand break resection and chromatin status. EMBO J. 36(17):2609-2625. doi: 10.15252/embj.201796631.
  • Borensztein M, Syx L, Ancelin K, Diabangouaya P, Picard C, Liu T, Liang JB, Vassilev I, Galupa R, Servant N, Barillot E, Surani A, Chen CJ and Heard E (2017) Xist-dependent imprinted X inactivation and the early developmental consequences of its failure. Nat Struct Mol Biol. 24(3):226-233. doi: 10.1038/nsmb.3365.
  • Bosveld F, Ainslie A and Bellaïche YJ (2017) Sequential activities of Dynein, Mud and Asp in centrosome-spindle coupling maintain centrosome number upon mitosis. J Cell Sci. 130(20):3557-3567. doi: 10.1242/jcs.201350.
  • da Rocha ST and Heard E (2017) Novel players in X inactivation: insights into Xist-mediated gene silencing and chromosome conformation. Nat Struct Mol Biol. 24(3):197-204. doi: 10.1038/nsmb.3370.
  • Davis MP, Carrieri C, Saini HK, van Dongen S, Leonardi T, Bussotti G, Monahan JM, Auchynnikava T, Bitetti A, Rappsilber J, Allshire RC, Shkumatava A, O’Carroll D and Enright AJ (2017) Transposon-driven transcription is a conserved feature of vertebrate spermatogenesis and transcript evolution. EMBO Rep. 18(7):1231-1247. doi: 10.15252/embr.201744059.
  • Djenoune L, Desban L, Gomez J, Sternberg JR, Prendergast A, Langui D, Quan FB, Marnas H, Auer TO, Rio JP, Del Bene F, Bardet PL and Wyart C (2017) The dual developmental origin of spinal cerebrospinal fluid-contacting neurons gives rise to distinct functional subtypes. Sci Rep. 7(1):719. doi: 10.1038/s41598-017-00350-1.
  • Dekker J and Heard E (2017) Structural and functional diversity of Topologically Associating Domains. FEBS Lett. 589(20 Pt A):2877-84. doi: 10.1016/j.febslet.2015.08.044.
  • Duroc, Y, Kumar, R, Ranjha, L, Adam, C, Guérois, R, Md Muntaz, K, Marsolier-Kergoat, MC, Dingli, F, Laureau, R, Loew, D, Llorente, B, Charbonnier, JB, Cejka, P and Borde V (2017) Concerted action of the MutLβ heterodimer and Mer3 helicase regulates the global extent of meiotic gene conversion. eLife 6, e21900. doi: 10.7554/eLife.21900.
  • Filipescu D, Naughtin M, Podsypanina K, Lejour V, Wilson L, Gurard-Levin Z.A, Orsi G.A, Simeonova I, Toufektchan E, Attardi L.D, Toledo F and Almouzni G (2017) Essential role for centromeric factors following p53 loss and oncogenic transformation. Genes Dev. 31(5):463-480.  doi: 10.1101/gad.290924.116.
  • Gendrel AV, Marion-Poll L, Katoh K and Heard E (2017) Random monoallelic expression of genes on autosomes: Parallels with X-chromosome inactivation. Semin Cell Dev Biol. 56:100-110. doi: 10.1016/
  • Gervais L and Bardin A (2017) Tissue homeostasis and aging: new insight from the Fly intestine. Curr Opin Cell Biol. 8:97-105. doi: 10.1016/
  • Giorgetti L and Heard E (2017) Closing the loop: 3C versus DNA FISH. Genome Biol. 17(1):215. doi: 10.1186/s13059-016-1081-2.
  • Greenberg MV*, Glaser J*, Borsos M, El Marjou F, Walter M, Teissandier A and Bourc’his D* (2017) Transient transcription in the early embryo sets an epigenetic state that programs postnatal growth. Nat Genet. 49(1):110-118. doi: 10.1038/ng.3718.
  • Guevorkian K and Maître JL (2017) Micropipette aspiration: A unique tool for exploring cell and tissue mechanics in vivo. Methods Cell Biol. 139:187-201. doi: 10.1016/bs.mcb.2016.11.012.
  • Guirao B and Bellaïche Y (2017) Biomechanics of cell rearrangements in Drosophila. Curr Opin Cell Biol. 48:113-124. doi: 10.1016/
  • Hocher A, Ruault, Kaferle P, Garnier M, Descrimes M, Morillon A and Taddei A (2017) Expanding heterochromatin reveals discrete subtelomeric domains delimited by chromatin landscape transitions. bioRxiv 187138.
  • Holoch D and Margueron R* (2017) Mechanisms regulating PRC2 recruitment and enzymatic activity. Trends Biochem Sci. 42(7):531-542. doi: 10.1016/j.tibs.2017.04.003.
  • Holoch D and Margueron R (2017) Chromatin biology: Breaking into the PRC2 cage. Nat Chem Biol. 2017 Apr;13(4):345-346. doi: 10.1038/nchembio.2313.
  • Kepten E and Miné-Hattab J (2017) Lamin A: A key protein in chromatin motion. Med Sci. 33(2):126-130. doi: 10.1051/medsci/20173302004.
  • Krens SFG, Veldhuis JH, Barone V, Čapek D, Maître JL, Brodland GW, Heisenberg CP (2017) Interstitial fluid osmolarity modulates the action of differential tissue surface tension in progenitor cell segregation during gastrulation. Development 144(10):1798-1806. doi: 10.1242/dev.144964.
  • Loda A, Brandsma JH, Vassilev I, Servant N, Loos F, Amirnasr A, Splinter E, Barillot E, Poot RA, Heard E and Gribnau J (2017) Genetic and epigenetic features direct differential efficiency of Xist-mediated silencing at X-chromosomal and autosomal locations. Nat Commun. 8(1):690. doi: 10.1038/s41467-017-00528-1.
  • Maître JL (2017) Mechanics of blastocyst morphogenesis. Biol Cell. 109(9):323-338. doi: 10.1111/boc.201700029.
  • Maître JL (2017) Mechanics of inner cell mass formation. Biol Aujourd’hui. 211(2):137-148. doi: 10.1051/jbio/2017021.
  • Mathieu J and Huynh J-R (2017) Bam and Otu can regulate stem cell fate by stabilizing cyclin A. Proc Natl Acad Sci USA. 114(24):6154-6156. doi: 10.1073/pnas.1706840114.
  • Mathieu J and Huynh J-R (2017) Monitoring complete and incomplete abscission in the germ line stem cell lineage of Drosophila ovaries. Methods Cell Biol. 137, 105-118. doi: 10.1016/bs.mcb.2016.03.033.
  • Miné-Hattab J, Recamier V, Izeddin I, Rothstein R and Darzacq X (2017) Multi-scale tracking reveals scale-dependent chromatin dynamics after DNA damage. Mol. Biol. Cell. pii: mbc.E17-05-0317. doi: 10.1091/mbc.E17-05-0317.
  • Morel D, Almouzni G, Soria JC and Postel-Vinay S (2017) Targeting chromatin defects in selected solid tumors based on oncogene addiction, synthetic lethality and epigenetic antagonism. Ann. Oncol. 28(2):254-269. doi: 10.1093/annonc/mdw552.
  • Müller S and Almouzni G (2017) Chromatin dynamics during the cell cycle at centromeres. Nat Rev Genet. 18(3):192-208. doi: 10.1038/nrg.2016.157.
  • Park S, Gonzalez DG, Guirao B, Boucher JD, Cockburn K, Marsh ED, Mesa KR, Brown S, Rompolas P, Haberman AM, Bellaïche Y and Greco V (2017) Tissue-scale coordination of cellular behaviour promotes epidermal wound repair in live mice. Nat Cell Biol. 19(2):155-163. doi: 10.1038/ncb3472.
  • Perez-Rico YA, Boeva V, Mallory AC, Bitetti A, Majello S, Barillot E and Shkumatava A* (2017) Comparative analyses of super-enhancers reveal conserved elements in vertebrate genomes. Genome Res. 27(2):259-268. doi: 10.1101/gr.203679.115.
  • Pinheiro D, Hannezo E, Herszterg S, Bosveld F, Gaugue I, Balakireva M, Wang Z, Cristo I, Rigaud SU, Markova O and Bellaïche Y* (2017) Transmission of cytokinesis forces via E-cadherin dilution and actomyosin flows. Nature 545(7652):103-107. doi: 10.1038/nature22041.
  • Pinheiro I & Heard E (2017) X chromosome inactivation: new players in the initiation of gene silencing. F1000Res. 6. pii: F1000 Faculty Rev-344. doi:  10.12688/f1000research.10707.1.
  • Pinheiro D and Bellaïche Y (2017) Studying cytokinesis in Drosophila epithelial tissues. Methods Cell Biol. 137:73-84. doi: 10.1016/bs.mcb.2016.04.013.
  • Portoso M, Ragazzini R, Brencic Z. Moiani A, Michaud A, Vassilev I, Wassef M, Servant N, Sargueil B and Margueron R* (2017) PRC2 is dispensable for HOTAIR-mediated transcriptional repression. EMBO J. 36(8):981-994. doi: 10.15252/embj.201695335.
  • Ranisavljevic N, Okamoto I, Heard E and Ancelin K (2017) RNA FISH to Study Zygotic Genome Activation in Early Mouse Embryos. Methods Mol Biol. 1605:133-145. doi: 10.1007/978-1-4939-6988-3_9.
  • Saavedra F, Rivera C, Rivas E, Merino P, Garrido D, Hernández S, Forné I, Vassias I, Gurard-Levin ZA, Alfaro I.E, Imhof A, Almouzni G and Loyola A (2017) PP32 and SET/TAF-Iβ proteins regulate the acetylation of newly synthesized histone H4. Nucleic Acids Res. 45(20):11700-11710. doi: 10.1093/nar/gkx775.
  • Sallé J, Gervais L, Boumard B, Stefanutti M, Siudeja K and Bardin AJ* (2017) Intrinsic regulation of enteroendocrine fate by Numb. EMBO J. 36(13):1928-1945. doi: 10.15252/embj.201695622.
  • Sauer P.V, Timm J, Liu D, Sitbon D, Boeri-Erba E, Velours C, Mücke N, Langowski J, Ochsenbein F, Almouzni G and Panne D (2017) Insights into the molecular architecture and histone H3-H4 deposition mechanism of yeast Chromatin assembly factor 1. eLife 6. pii: e23474. doi: 10.7554/eLife.23474.
  • Sitbon D, Podsypanina K, Yadav T and Almouzni G (2017) Shaping Chromatin in the Nucleus: The Bricks and the Architects. Cold Spring Harb Symp Quant Biol. 82:1-14. doi: 10.1101/sqb.2017.82.033753.
  • Siudeja K and Bardin AJ (2017) Somatic recombination in adult tissues: What is there to learn? Fly (Austin) 11(2):121-128. doi: 10.1080/19336934.2016.1249073.
  • Tarabay Y, Achour M, Teletin M, Ye T, Teissandier A, Mark M, Bourc’his D and Viville S (2017) Tex19 paralogs are new members of the piRNA pathway controlling retrotransposon suppression. J Cell Sci. 130(8):1463-1474. doi: 10.1242/jcs.188763.
  • Teissandier A and Bourc’his D (2017) Gene body DNA methylation conspires with H3K36me3 to preclude aberrant transcription. EMBO J. 36(11):1471-1473. doi: 10.15252/embj.201796812.
  • Tissot N, Lepesant JA, Bernard F, Legent K, Bosveld F, Martin C, Faklaris O, Bellaïche Y, Coppey M and Guichet A (2017) Distinct molecular cues ensure a robust microtubule-dependent nuclear positioning in the Drosophila oocyte. Nat Commun. 8:15168. doi: 10.1038/ncomms15168.
  • Vallot C, Patrat C, Collier AJ, Huret C, Casanova M, Liyakat Ali TM, Tosolini M, Frydman N, Heard E, Rugg-Gunn PJ and Rougeulle C (2017) XACT Noncoding RNA Competes with XIST in the Control of X Chromosome Activity during Human Early Development. Cell Stem Cell. 20(1):102-111. doi: 10.1016/j.stem.2016.10.014.
  • Veldhuis JH, Ehsandar A, Maître JL, Hiiragi T, Cox S, Brodland GW (2017) Inferring cellular forces from image stacks. Philos Trans R Soc Lond B Biol Sci. 372(1720). pii: 20160261. doi: 10.1098/rstb.2016.0261.
  • Wassef M*, Luscan A, Battistella A, Le Corre S, Li H, Wallace M, Vidaud M and Margueron R (2017) Versatile and precise gene-targeting strategies for functional studies in mammalian cell lines. Methods 121-122:45-54. doi: 10.1016/j.ymeth.2017.05.003.
  • Xu J, Carter AC, Gendrel AV, Attia M, Loftus J, Greenleaf WJ, Tibshirani R, Heard E and Chang HY (2017) Landscape of monoallelic DNA accessibility in mouse embryonic stem cells and neural progenitor cells. Nat Genet. 49(3):377-386. doi: 10.1038/ng.3769.