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2015 Publications

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06/09/2020
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See below the list of our 2015 publications
Publications 2015
  • Auer TO*, Xiao T, Bercier V, Gebhardt C, Duroure K, Concordet J. P, Wyart C, Suster M, Kawakami K, Wittbrodt J, Baier H and Del Bene F* (2015) Deletion of a kinesin I motor unmasks a mechanism of homeostatic branching control by neurotrophin-3. eLife 4. doi: 10.7554/eLife.05061.
  • Borde V, de Massy B (2015) Meiosis: Early DNA Double-Strand Breaks Pave the Way for Inter-Homolog Repair. Dev Cell. 32(6):663-4. doi: 10.1016/j.devcel.2015.03.011.
  • Bourc’his D* (2015) Cartographie des profils de méthylation de l’ADN: quelles méthodes, pour quelle résolution et quel coût ? (2015) Corr. Onco-Théranostic, Vol IV-n°1-janv-fév-mars.
  • Bruno C, Carmignac V, Netchine I, Choux C, Duffourd Y, Faivre L, Thauvin-Robinet C, Le Bouc Y, Sagot P, Bourc’his D and Fauque P (2015) Germline correction of an epimutation related to Silver-Russell syndrome. Hum Mol Genet. 24(12):3314-21. doi: 10.1093/hmg/ddv079.
  • Chaligne R, Popova T, Mendoza-Parra M-A, Saleem M-AM, Gentien D, Ban K, Piolot T, Leroy O, Mariani O, Gronemeyer H, Vincent-Salomon A, Stern M-H and Heard E (2015) The inactive X chromosome is epigenetically unstable and transcriptionally labile in breast cancer. Genome Res. 25(4):488-503. doi: 10.1101/gr.185926.114.
  • Cheloufi S, Elling U, Hopfgartner B, Jung YL, Murn J, Ninova M, Hubmann M, Badeaux AI, Ang CE, Tenen D, Wesche DJ, Abazova N, Hogue M, Tasdemir N, Brumbaugh J, Rathert P, Jude J, Ferrari F, Blanco A, Fellner M, Wenzel D, Zinner M, Vidal SE, Bell O, Stadtfeld M, Chang HY, Almouzni G, Lowe SW, Rinn J, Wernig M, Aravin A, Shi Y, Park PJ, Penninger JM, Zuber J and Hochedlinger K (2015) The histone chaperone CAF-1 safeguards somatic cell identity. Nature 528(7581):218-24. doi: 10.1038/nature15749.
  • Chu C, Zhang QC, da Rocha ST, Flynn RA, Bharadwaj M, Calabrese JM, Magnuson T, Heard E and Chang HY (2015) Systematic Discovery of Xist RNA Binding Proteins. Cell 161(2):404-16. doi: 10.1016/j.cell.2015.03.025.
  • Christophorou N, Rubin T, Bonnet I, Piolot T, Arnaud M, Huynh J-R (2015) Microtubule-driven nuclear rotations promote meiotic chromosome dynamics. Nat Cell Biol. 17(11):1388-400. doi: 10.1038/ncb3249.
  • Clement C and Almouzni G (2015) MCM2 binding to histones H3-H4 and ASF1 supports a tetramer-to-dimer model for histone inheritance at the replication fork. Nat Struct Mol Biol. 22(8):587-9. doi: 10.1038/nsmb.3067.
  • Dekker J and Heard E (2015) Structural and functional diversity of Topologically Associating Domains. FEBS Lett. 589(20 Pt A):2877-84. doi: 10.1016/j.febslet.2015.08.044.
  • De Oca RM, Gurard-Levin ZA, Berger F, Rehman H, Martel E, Corpet A, de Koning L, Vassias I, Wilson LOW, Meseure D, Reyal F, Savignoni A, Asselain B, Sastre-Garauk X and Almouzni G (2015) The histone chaperone HJURP is a new independent prognostic marker for luminal A breast carcinoma. Mol Oncol. 9(3):657-74. doi: 10.1016/j.molonc.2014.11.002.
  • Eikenes AH, Malerod L, Christensen AL, Steen CB, Mathieu J, Nezis IP, Liestol K, Huynh J-R, Stenmark H and Haglund K (2015) ALIX and ESCRT-III Coordinately Control Cytokinetic Abscission during Germline Stem Cell Division In Vivo. Plos Genet. 11(1):e1004904. doi: 10.1371/journal.pgen.1004904.
  • Fernandez-Sanchez ME, Barbier S, Whitehead J, Bealle G, Michel A, Latorre-Ossa H, Rey C, Fouassier L, Claperon A, Brulle L, Girard E, Servant N, Rio-Frio T, Marie H, Lesieur S, Housset C, Gennisson J-L, Tanter M, Menager C, Fre S, Robine S and Farge E (2015) Mechanical induction of the tumorigenic beta-catenin pathway by tumour growth pressure. Nature 523(7558):92-5. doi: 10.1038/nature14329.
  • Fidelin K, Djenoune L, Stokes C, Prendergast A, Gomez J, Baradel A, Del Bene F and Wyart C (2015) State-Dependent Modulation of Locomotion by GABAergic Spinal Sensory Neurons. Curr Biol. 25(23):3035-47. doi: 10.1016/j.cub.2015.09.070.
  • Galupa R and Heard E (2015) X-chromosome inactivation: new insights into cis and trans regulation. Curr Opin Genet Dev. 31:57-66. doi: 10.1016/j.gde.2015.04.002.
  • Giorgetti L, Piolot T and Heard E (2015) High-Resolution 3D DNA FISH Using Plasmid Probes and Computational Correction of Optical Aberrations to Study Chromatin Structure at the Sub-megabase Scale. Methods Mol Biol. 1262:37-53. doi: 10.1007/978-1-4939-2253-6_3.
  • Gogendeau D, Siudeja K, Gambarotto D, Pennetier C, Bardin AJ and Basto R (2015) Aneuploidy causes premature differentiation of neural and intestinal stem cells. Nat Commun. 6:8894. doi: 10.1038/ncomms9894.
  • Greenberg MV and Bourc’his D* (2015) Cultural relativism: maintenance of genomic imprints in pluripotent stem cell culture systems. Curr Opin Genet Dev. 31:42-49. doi: 10.1016/j.gde.2015.04.005.
  • Guidi M, Ruault M, Marbouty M, Loiodice I, Cournac A, Billaudeau C, Hocher A, Mozziconacci J, Koszul R, Taddei A (2015) Spatial reorganization of telomeres in long-lived quiescent cells. Genome Biol. 16:206. doi: 10.1186/s13059-015-0766-2.
  • Liao H-F, Mo C-F, Wu S-C, Cheng D-H, Yu C-Y, Chang K-W, Kao T-H, Lu C-W, Pinskaya M, Morillon A, Lin S-S, Cheng WTK, Bourc’his D, Bestor T, Sung L-Y, Lin S-P (2015) Dnmt3l-knockout donor cells improve somatic cell nuclear transfer reprogramming efficiency. Reproduction. 150(4):245-56. doi: 10.1530/REP-15-0031.
  • Mallory AC and Shkumatava A* (2015) LncRNAs in vertebrates: advances and challenges. Biochimie 117:3-14. doi: 10.1016/j.biochi.2015.03.014.
  • Martin-Bermudo M-D, Bardet P-L, Bellaiche Y, Malartre M. (2015) The vav oncogene antagonises EGFR signalling and regulates adherens junction dynamics during Drosophila eye development. Development 142(8):1492-501. doi: 10.1242/dev.110585.
  • Matias N. R, Mathieu J and Huynh J-R* (2015) Abscission is regulated by the ESCRT-III protein shrub in Drosophila germline stem cells. PLoS Genet. 11(2):e1004653. doi: 10.1371/journal.pgen.1004653.
  • Molla-Herman A, Valles A.M, Ganem-Elbaz C, Antoniewski C and Huynh J-R* (2015) tRNA processing defects induce replication stress and Chk2-dependent disruption of piRNA transcription. EMBO J. 34(24):3009-27. doi: 10.15252/embj.201591006.
  • Montes de Oca R, Gurard-Levin ZA, Berger F, Rehman H, Martel E, Corpet A, de Koning L, Vassias I, Wilson LOW, Meseure D, Reyal F, Savignoni A, Asselain B, Sastre-Garau X, Almouzni G (2015) The histone chaperone HJURP is a new independent prognostic marker for luminal A breast carcinoma. Mol Oncol. 9(3):657-74. doi: 10.1016/j.molonc.2014.11.002.
  • Paolini A, Duchemin A-L, Albadri S, Patzel E, Bornhorst D, Avalos PG, Lemke S, Machate A, Brand M, Sel S, Di Donato V, Del Bene F, Zolessi FR, Ramialison M, Poggi L (2015) Asymmetric inheritance of the apical domain and self-renewal of retinal ganglion cell progenitors depend on Anillin function. Development. 142(5):832-9. doi: 10.1242/dev.118612.
  • Polo SE and Almouzni G (2015) Chromatin dynamics after DNA damage: The legacy of the access-repair-restore model. DNA Repair. 36:114-21. doi: 10.1016/j.dnarep.2015.09.014..
  • Richet N, Liu D, Legrand P, Velours C, Corpet A, Gaubert A, Bakail M, Moal-Raisin G, Guerois R, Compper C, Besle A, Guichard B, Almouzni G and Ochsenbein F (2015) Structural insight into how the human helicase subunit MCM2 may act as a histone chaperone together with ASF1 at the replication fork. Nucleic Acids Res. 43(3):1905-17. doi: 10.1093/nar/gkv021.
  • Rivera C, Saavedra F, Alvarez F, Diaz-Celis C, Ugalde V, Li J, Forne I, Gurard-Levin ZA, Almouzni G, Imhof A and Loyola A (2015) Methylation of histone H3 lysine 9 occurs during translation. Nucleic Acids Res. 43(19):9097-106. doi: 10.1093/nar/gkv929.
  • Rodilla V, Dasti A, Huyghe M, Lafkas D, Laurent C, Reyal F and S. Fre (2015) Luminal Progenitors Restrict Their Lineage Potential during Mammary Gland Development. PLoS Biol. 13(2):e1002069. doi: 10.1371/journal.pbio.1002069.
  • Romanoski CD, Glass CK, Stunnenberg HG, Wilson L and Almouzni G (2015) Epigenomics: Roadmap for regulation. Nature 518(7539):314-6. doi: 10.1038/518314a.
  • Romeo K, Louault Y, Cantaloube S, Loiodice I, Almouzni G and Quivy J-P (2015) The SENP7 SUMO-Protease Presents a Module of Two HP1 Interaction Motifs that Locks HP1 Protein at Pericentric Heterochromatin. Cell Reports 14(10):771-82. doi: 10.1016/j.celrep.2015.01.004.
  • Sanulli, S, Justin N, Teissandier A, Ancelin K, Portoso M, Caron M, Michaud A, Lombard B, da Rocha S.T, Offer J, Loew L, Servant N, Wassef M, Burlina F, Gamblin S.J, Heard E and Margueron R* (2015) Jarid2 Methylation via the PRC2 Complex Regulates H3K27me3 Deposition during Cell Differentiation. Mol. Cell. 57(5):769-783. doi: 10.1016/j.molcel.2014.12.020.
  • Servant N, Varoquaux N, Lajoie BR, Viara E, Chen C-J, Vert J-P, Heard E, Dekker J and Barillot E (2015) HiC-Pro: an optimized and flexible pipeline for Hi-C data processing. Genome Biol. 16:259. doi: 10.1186/s13059-015-0831-x.
  • Siudeja K, Nassari S, Gervais L, Skorski P, Lameiras S, Stolfa D, Zande M, Bernard V, Rio Frio T and Bardin A.J* (2015) Frequent Somatic Mutation in Adult Intestinal Stem Cells Drives Neoplasia and Genetic Mosaicism during Aging. Cell Stem Cell. 17(6):663-674. doi: 10.1016/j.stem.2015.09.016.
  • Tachiwana H, Mueller S, Bluemer J, Klare K, Musacchio A and Almouzni G (2015) HJURP Involvement in De Novo CenH3(CENP-A) and CENP-C Recruitment. Cell Rep. 11(1):22-32. doi: 10.1016/j.celrep.2015.03.013.
  • Tiana G, Villa F, Zhan Y, Capelli R, Paissoni C, Sormanni P, Heard E, Giorgetti L and Meloni R (2015) MonteGrappa: An iterative Monte Carlo program to optimize biomolecular potentials in simplified models. Comput Phys Commun. 186:93-104. doi: 10.1016/j.cpc.2014.09.012.
  • Wassef M, Rodilla V, Teissandier A, Zeitouni B, Gruel N, Sadacca B, Irondelle M, Charruel M, Ducos B, Michaud A, Caron M, Marangoni E, Chavrier P, Le Tourneau C, Kamal M, Pasmant E, Vidaud M, Servant N, Reyal F, Meseure E, Vincent-Salomon A, Fre S and Margueron R (2015) Impaired PRC2 activity promotes transcriptional instability and favors breast tumorigenesis. Genes Dev. 29(24):2547-62. doi: 10.1101/gad.269522.115.
  • Zamudio N, Barau J, Teissandier A, Walter M, Borsos M, Servant N and Bourc’his D (2015) DNA methylation restrains transposons from adopting a chromatin signature permissive for meiotic recombination. Genes Dev. 29(12):1256-70. doi: 10.1101/gad.257840.114.